Hi Phil, Simone, DepMap team,
I’m interested in running the code underlying the Predictability tabs, which predicts dependency scores from baseline omics. I found the methodology preprint via the readme (https://www.biorxiv.org/content/10.1101/2020.02.21.959627v3), and its apparently-associated github repo (depmap-crispr-vs-rnai/src/ensemble_prediction_pipeline at main · broadinstitute/depmap-crispr-vs-rnai · GitHub).
Can you confirm if this github repo still matches the pipeline you use to generate the predictability tab data? If not, can you please point me to it?
Thank you very much - Brendan
1 post - 1 participant