comparison between raw counts and log TPM values
Hello there, I downloaded first the log TPM values and plotted them for a specific gene and found that it is expressed. Then, I have to use another normalization method and downloaded the raw counts....
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I am unable to Add a data column in cell line selector. 1 post - 1 participant Read full topic
View ArticleHow to label the cells in DepMap 2.0
I have been using DepMap v 1.0 for analyses where I would like to label the cells from a list of defined cell line context. Does anyone know how I can do this labeling in V 2.0? There used to be a...
View ArticleAUC and Correlation coefficient
I am new to using Depmap. Just a very simple question. When I enter a drug of interest, it produces a list of genes “Top Correlated Expression”. There are mainly genes with a positive correlation....
View ArticleRequest to include batch information for all datasets
I would like to request that you share all of the information you have on batches, such as batch ID, processing date, etc., for all omics datasets. Currently, it is impossible to quantify the extent...
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